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Table of Contents

Systems Biology Software

  • CellDesigner 4.0.1 (including plugin SBMLsqueezer 1.1)
  • COPASI 4.4.29
  • semanticSBML 1.0.8
  • Xppaut 5.98
  • TiDE
  • Cytoscape 2.6.2 (including plugin BiNoM)
  • SBMLeditor
  • SBML2LaTeX
  • OpenAlea
  • libSBML 3.3.2

Systems Biology Models

  • BioModels Database
  • Yeast consensus model version 2.0

Convenience Tools

  • gtk-recordMyDesktop
  • XML Copy Editor 1.2.0.2

Python

  • epydoc
  • NumArray
  • NumPy
  • Python 2.5, IPython
  • PyX
  • Soappy
  • SciPy

software_included1

 
software_included.txt · Last modified: 2009/07/08 15:35 by wolfliebermeister
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SB.OS is developed @ Theoretical Biophysics / Humboldt-Universität zu Berlin